ubuntu安装homer

ref: Homer Software and Data Download

# 满足条件：

The following UNIX utilities are required to use HOMER.  You might need to run your UNIX package manager to install them if missing (i.e. "sudo apt-get install wget"):

gcc g++ make perl zip/unzip gzip/gunzip wget

The following NGS tools may be required to perform certain analyses and are highly highly recommended:

samtools

R (with Bioconductor packages DESeq2, edgeR)

---

# conda：

conda install wget samtools r-essentials bioconductor-deseq2 bioconductor-edger

# 下载：

Download the "configureHomer.pl" script and place it in a directory where you would like homer to be installed (i.e. /home/chucknorris/homer/).

# 安装：

perl configureHomer.pl -install

# 环境：

gedit ~/.bashrc

source ~/.bashrc